PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON86387.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | MYB | ||||||||
Protein Properties | Length: 340aa MW: 38450.6 Da PI: 5.5624 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 45.7 | 1.5e-14 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed++l +++k +G g W + +++ g++R +k+c++rw++yl PON86387.1 14 RGAWTAMEDKILTEYIKIHGEGKWGSLPERAGLKRFGKSCRLRWLNYL 61 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 47.9 | 3.1e-15 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T +E++l+++ +++lG++ W++Ia +++ gRt++++k++w++ PON86387.1 67 RGNITSDEEDLIIRIHNLLGNR-WSLIAGRLP-GRTDNEIKNYWNT 110 7999******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 340 aa Download sequence |
MGRSTPCSKE DLNRGAWTAM EDKILTEYIK IHGEGKWGSL PERAGLKRFG KSCRLRWLNY 60 LKPGIKRGNI TSDEEDLIIR IHNLLGNRWS LIAGRLPGRT DNEIKNYWNT NILKKIQANS 120 LKSNHTTSRK PSSNQSCALV PQQPSYKIHN TTTSRVVRTK ATRCTKVVLL HQEPQNKVVL 180 LGHDNEMNGG GSTSIDDHNH DHDHDDHRCS NTSEPPVDEV PSAVDYDHDQ CVNLNCEQTF 240 NDVPDKSNSS SQFMNVDFGT DDQDDFLSQF LNIDFGFNDD LAEKIISSSN SKGNSCSKSE 300 KENETFLFRH DMPFDLDVEP ATDSLIDQAD DDMDWLKGLI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G35550.1 | 3e-65 | MYB family protein |