PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PON86197.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 235aa MW: 26055.2 Da PI: 6.5065 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.3 | 3.6e-08 | 3 | 25 | 23 | 46 |
-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqk 46 +W+ Ia+ ++ gRt++++k++w++ PON86197.1 3 RWSVIASQLP-GRTDNDVKNYWNT 25 4*********.***********97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 235 aa Download sequence |
MVRWSVIASQ LPGRTDNDVK NYWNTKLKKK LLAGKMSLIT TNTSSNPIPT STSTTTDHLI 60 SGLKPSFQPP ILVPKLQTLP ENSSLSCPNS LTAPLRMISA DINYNVPGLS VYDQRLSFNN 120 SVMDFSDHQF DHVNSKKNRD IINGLLSQEV LSISHSSNSI VPASDHHIQH NNLKRASILP 180 EISGCDEYSD GTTTLMDFEF GLSPYDNIVN DVSFEEKAAY NSMSLADHQS IINHH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G37780.1 | 6e-14 | MYB family protein |