PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON86105.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family MYB_related
Protein Properties Length: 313aa    MW: 33835.7 Da    PI: 8.277
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON86105.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.14.7e-14102146347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
       PON86105.1 102 PWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 146
                      7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MSLSSSANDS AADSGVGEIM LFGVRVVVDS MRKSVSLNNL SQYEQPQEVA VAVTVAGGPG  60
ANNSSSSNNA GKDDGAPGYT SENDVVHNSG GNRERERKRG IPWTEEEHKL FLLGLQKVGK  120
GDWRGISRNF VKTRTPTQVA SHAQKYFLRR NNHNRRRRRS SLFDITTDTV TAIPMEEEQF  180
HHQDNASQSL PSPIESCNPS GFSLLTTCPL TVSPAVLPAP IENPIENLTL GQRIPENNAA  240
AKLVRPVARH SIPHGTTMTD LNLNLKSAID PSPLSLKLAL PTDPRESSSS SARHSAFQSM  300
SSFNNGDSII TVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74840.23e-53MYB_related family protein