PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON86015.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

bHLH

Protein Properties

Length: 450aa MW: 49784.7 Da PI: 5.9705

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON86015.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.6	6e-10	255	302	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq PON86015.1 255 SHSLAERVRREKISERMKYLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 302 8************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 450 aa Download sequence
MLHCLNTPGN IAGNCSDLTV LERQRARLKW QQEQLQRQQQ QQESSYFSGS ELSGVFSFQP 60 HHDQVQSFQL GLHGDSAVNR PVKPDPGLEN GWPELDKLEM PDLGFGSSST GLVNGTTLPT 120 TPGFQMNGAI SRTYSCPPTV ATATVTAEVK AREAVVQPEK LSSVAGRESF KKRKNDKLQN 180 SKAVSEDHDS REKRIKGSAE EGDSKITEQN SRKNVVTNNR ESSSGDTSKE NSKASEVQKP 240 DYIHVRARRG QATDSHSLAE RVRREKISER MKYLQDLVPG CNKITGKAGM LDEIINYVQS 300 LQRQVEFLSM KLAAVNPRLD FNIDDLFAKE MFPACTAGFQ TLGMSAEMSN SAYLQFNPGE 360 QVVSCGGLDM AMNSPDMADL RRTISAPVSI PETFLDASCY TQVQPPATWD TELQNLFSLE 420 YNQGRSTTFT CQLPFTGSNS IEASNLKMEM

Sequence ? help Back to Top

Protein Sequence Length: 450 aa Download sequence

MLHCLNTPGN IAGNCSDLTV LERQRARLKW QQEQLQRQQQ QQESSYFSGS ELSGVFSFQP  60
HHDQVQSFQL GLHGDSAVNR PVKPDPGLEN GWPELDKLEM PDLGFGSSST GLVNGTTLPT  120
TPGFQMNGAI SRTYSCPPTV ATATVTAEVK AREAVVQPEK LSSVAGRESF KKRKNDKLQN  180
SKAVSEDHDS REKRIKGSAE EGDSKITEQN SRKNVVTNNR ESSSGDTSKE NSKASEVQKP  240
DYIHVRARRG QATDSHSLAE RVRREKISER MKYLQDLVPG CNKITGKAGM LDEIINYVQS  300
LQRQVEFLSM KLAAVNPRLD FNIDDLFAKE MFPACTAGFQ TLGMSAEMSN SAYLQFNPGE  360
QVVSCGGLDM AMNSPDMADL RRTISAPVSI PETFLDASCY TQVQPPATWD TELQNLFSLE  420
YNQGRSTTFT CQLPFTGSNS IEASNLKMEM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34530.1	3e-67	bHLH family protein