PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON85912.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | WOX | ||||||||
Protein Properties | Length: 276aa MW: 29802.1 Da PI: 6.117 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 48.7 | 1.3e-15 | 32 | 92 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+++eq+ +Le+ F++ +p ++e ++ k l ++ +++V++WFqNrR + ++ PON85912.1 32 RSRWTPKPEQILILESIFNSgMVNPPKDETVRIRKLLekfgSVGDANVFYWFQNRRSRSRR 92 89*****************99*************************************997 PP | |||||||
2 | Wus_type_Homeobox | 107.2 | 9.7e-35 | 31 | 94 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RWtP+peQi iLe++++sG+++P+k+e+ ri++ Le++G ++d+NVfyWFQNr++R+r++q PON85912.1 31 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQ 94 589***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 276 aa Download sequence |
MDQDQVQDRP NSPTNGSEIR NSTNSTTEPA VRSRWTPKPE QILILESIFN SGMVNPPKDE 60 TVRIRKLLEK FGSVGDANVF YWFQNRRSRS RRRQRQLQAQ LSNVGGAIQY ESSNSTTATS 120 TTPAAAMAGF GGGSAYSILS SPSNSSYLMG GCSSSNSCGG LGDDHGHVEN SFFQVSGGQM 180 GFPEIEQSSA VTSVLYPPDT SNMHFQLSGF VTVFINGVPT EVPKGPIDLK PMFGQDVILV 240 HSSGVPVPTN DFGILLQSLQ PGESYFLVPR PSLSNN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G03660.1 | 7e-34 | WOX family protein |