PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON85752.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 356aa    MW: 40775.9 Da    PI: 4.5426
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON85752.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.67.9e-12190233654
                 HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                  ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  PON85752.1 190 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYMKEL 233
                 589*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MELNEHGFLE ELLALRRDTW EAIPTEMNEL FSNTELGLDY YFDQNPSTIF PNSCSSQEMI  60
SPQLEQSFNY NNNNNHHNNY SFNEVYCPLS NEFLVPQFTS TDSSYNTTTT TATTQLDTPT  120
FNPIQEDFSL TRLEEEELGI LGDEIHILET QASCKMEPVH SPEIPVFNMG LPLETKNRAK  180
KLQGQPSKNL MAERRRRKRL NDRLSMLRSI VPKISKMDRT SILGDTIDYM KELLERINNL  240
QQEIEASSTH FSEMSLFKDV KPNEVLVRNS PKFDVERRNV DTRIEICCAG KPGLLFSTVT  300
TLEALGLEIE QCVISCFNDF AMQASCSEDL EKRALINSED IKQALFRNAG YGGRCM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1193200ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.17e-85bHLH family protein