PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON85664.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family WRKY
Protein Properties Length: 193aa    MW: 21584.7 Da    PI: 6.7875
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON85664.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.24.5e-30103161159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 +dDg++WrKYG+K+vk+s++pr+YY+C+s gC+vkk+ver+++d ++v++tY g Hnhe
  PON85664.1 103 MDDGFKWRKYGKKSVKNSPNPRNYYKCSSGGCNVKKRVERDRDDSSYVITTYDGVHNHE 161
                 59********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MNFNENPNPN WTHFPANIDP LAEFELSDYL VFEDGVDQFN SLSPQSLMSS ENFAAIGGTG  60
AASSTETSNM SGATSRNTNM QKNKMDQVGH RVAFRTKSEL EVMDDGFKWR KYGKKSVKNS  120
PNPRNYYKCS SGGCNVKKRV ERDRDDSSYV ITTYDGVHNH ESPSVVYYNQ MPLMAPNAWN  180
LQASSHSHSS CSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64810.16e-54WRKY family protein