PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON85625.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family FAR1
Protein Properties Length: 230aa    MW: 26646.9 Da    PI: 8.4813
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON85625.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1781.8e-2480166189
        FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                 +fYn+YA++vGFs+r+sk +k  ++g+i++rtf+Cs eg+re++k++ ++ + +ra+tr gC aklk+k ++ ++++v ++  eH+H+ 
  PON85625.1  80 EFYNSYAYKVGFSIRRSKGHKD-KDGKIKDRTFCCSSEGHREKDKRN-VNVKCPRAQTRFGCLAKLKIKSTQMNTYRVVEFIAEHTHQT 166
                 6****************99998.8888*****************999.99*************************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MENINSALDE ELQSRRKLDF QENDGNCDQS HHLKVIVEDD SKEEATDCGK KNIESLHSKI  60
PSEAIPQVNM EFEKEEDVYE FYNSYAYKVG FSIRRSKGHK DKDGKIKDRT FCCSSEGHRE  120
KDKRNVNVKC PRAQTRFGCL AKLKIKSTQM NTYRVVEFIA EHTHQTSTSN KSHLHRSQRR  180
LTLSQAAEID LADISRIAPK SSWELMYRRA GSCENVGFTL VDFRNHIRTK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-22FAR1 family protein