PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON85348.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | MYB_related | ||||||||
Protein Properties | Length: 77aa MW: 8843.79 Da PI: 6.8034 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 33.7 | 8.7e-11 | 31 | 71 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++++E l+++ ++ G + W++Ia +++ gRt++q+ +w PON85348.1 31 QFSEDEKTLIIRMYNLVGER-WSLIAGRIP-GRTAEQIEKYWK 71 69******************.*********.***********7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 77 aa Download sequence |
MAHSRHSSSG DNFAHSPEIN GEAPKNEVEV QFSEDEKTLI IRMYNLVGER WSLIAGRIPG 60 RTAEQIEKYW KSRNSQQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01380.1 | 3e-18 | MYB_related family protein |