PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON85212.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 315aa    MW: 34485.7 Da    PI: 8.0159
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON85212.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.74e-203585256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                ++ GVr+++ +grWvAeI+d s   +r r +lg+++t+eeAa+a+++a+++l+ge
  PON85212.1 35 RFVGVRQRP-SGRWVAEIKDSS---QRVRLWLGTYDTPEEAARAYDEAARALRGE 85
                589******.7*********43...36**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MAGSEATKTG TPTTSTTTTT TTTNTVQSRR PAVRRFVGVR QRPSGRWVAE IKDSSQRVRL  60
WLGTYDTPEE AARAYDEAAR ALRGENARTN FAAAPPPDSC NSSPLVSSPS SGAGPEGRQG  120
LSFSSLKAKL SKNLQSIIAR TSENNNNKSS KSRVSDHFTF ASIFHFRKYY NDHQYQNTMM  180
MRNMNIDSNV VQPSIVVPPH VQDHQTTSCS SSSWETSSVS DCSPEWVGFR QAGFDSDGSD  240
IGEGFADHQM NGNYWMDSPE VSVCSTNRSE GSISTNSNNS GSKRFKVSSS VVVPPTFSTT  300
TPFLYDHGHD HEIIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.13e-16ERF family protein