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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON85181.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | TCP | ||||||||
Protein Properties | Length: 358aa MW: 38485.4 Da PI: 7.7303 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 112.3 | 6.9e-35 | 71 | 142 | 2 | 73 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec 73 a+k+ +++++h kv+gR+RR+R++a caar+F+L++eLG+++d++ti WLl+ a+pai+++tgt++ +a ++ PON85181.1 71 ATKRASTKDRHRKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAM 142 899*************************************************************88888444 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 358 aa Download sequence |
MAMTQRNEAE EEKERRAVDL RINAGEEEEE ERNDEESNGT TSLNEAVVEL KEEPAEPLQI 60 VPVALQVPAP ATKRASTKDR HRKVEGRGRR IRMPAACAAR IFQLTRELGH KSDGETIRWL 120 LEHAEPAIIA ATGTGTVPAI AMSVNGTLKI PTAAPDPEPD DPAQRRKRKR PVNSEYVDVN 180 DGVSVSVSAG LAPLTQTQVQ VQQLQQQPVP RQGLVPMWAI PSNAVVPGAF FVVPPMATTS 240 TTATASTATT QPHIFTFPAS ATPFINISAA RPISSFVSSM ANLVTTPAQL HATTTTTTNL 300 NSTNSVSKPP SSMAAPTGNS GTGAGTKTAT AKTQMLRDFS LEIYDKKELQ FMTRSSKN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 165 | 170 | RRKRKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45680.1 | 1e-55 | TCP family protein |