PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON85029.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ZF-HD
Protein Properties Length: 292aa    MW: 32149.7 Da    PI: 8.3199
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON85029.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer956.1e-3048106257
  ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpseg..ee.gtaaalkCaACgCHRnFHRrev 57 
                  ++v+Y+eC++NhAas+Ggha DGCgEfmp  +  e+ ++ ++l CaACgCHRnFHRrev
   PON85029.1  48 TNVKYRECMRNHAASIGGHANDGCGEFMPCGSalEDsTSGDSLSCAACGCHRNFHRREV 106
                  689*************************9743113346789****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MDLSVVPYKH HHHHHQSTKV ENESEDGDVV EPKSSADKNG LKSTNSNTNV KYRECMRNHA  60
ASIGGHANDG CGEFMPCGSA LEDSTSGDSL SCAACGCHRN FHRREVILLG GVQYSPSPPP  120
MALLYNAAPA TPRWDPKMVV GPPRRHHPPH RNGGRDSHED GSEREYDRRS SETPEREDQV  180
PAMATGSAAS GGGSGGGKRF RTKFTAEQKD RMLEFAERIG WRIQRQDEAA INQFCSQIGV  240
KRNVLKVWMH NNKNAHRRRE PLPTTSSTLP EGPMQPPPIP PHSAPQQPVV GV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.13e-50ZF-HD family protein