PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON84695.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

MYB

Protein Properties

Length: 332aa MW: 36239.6 Da PI: 8.6453

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON84695.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.8	2.8e-19	12	57	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEde l ++v+ +G+++W++I++ ++ gR++k+c++rw + PON84695.1 12 KGPWSPEEDEALRRLVQNYGPRNWSLISKSIP-GRSGKSCRLRWCNQ 57 79****************************.*********985 PP
2	Myb_DNA-binding	58.2	1.8e-18	66	108	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEde +v+a++++G++ W+tIar ++ gRt++ +k++w++ PON84695.1 66 PFTPEEDETIVRAHARFGNK-WATIARLLN-GRTDNAIKNHWNST 108 89****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
MGSTKKDMDR IKGPWSPEED EALRRLVQNY GPRNWSLISK SIPGRSGKSC RLRWCNQLSP 60 EVEHRPFTPE EDETIVRAHA RFGNKWATIA RLLNGRTDNA IKNHWNSTLK RKCSSMLEDS 120 NGDAHDHHHH QPLKRSASVG APGTVVTGGF VNPGSPSGSD LSDSSLPGMS LTQIFKSVPI 180 TGPPITPSSQ PHIDTSSDPP TSLSLSLPSS DSSEVSNRGS GSGFGSFRAG SPTQMVHPHV 240 PQQPPPLPPP EPPVAAVLLQ QGEPGHVPSQ GTCGQFGYEK QFFSAEFLAV MQEMIRKEVR 300 TYMSGFEHNG LYFHTEAIRN AVVKRIGVSK IE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	3e-73	MYB family protein