PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON84577.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

bHLH

Protein Properties

Length: 643aa MW: 71590.1 Da PI: 5.2588

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON84577.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	45.5	1.3e-14	444	490	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h ErrRR+r+N++f+ L++++P++ K +K+++L A+eY+k+L+ PON84577.1 444 NHALSERRRRERLNEKFSILKTMVPSL-----SKEDKVSVLDDAIEYLKELE 490 7999********************8.....6**************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 643 aa Download sequence
MATGPQNEEG VPLPDNLNKR LALAVRSIQW SYAIFWSISS TQPGVLEWEE GYYNGDIKTR 60 KTIQAIELNA DEMGLQRSEQ LRELYDSLSA GETSPQAKRP SAALSPEDLS DAEWYYLVCM 120 SFVFNIGQGL PGRALANGQP IWLYNAHYAD SKVFSRSLLA KSASIQTVVC FPLLGGVIEL 180 GTTDPVVEDY ALIQQVKMSI LEIPCPMASK KSDCSAGNTR KDHGFAYAAV DHDLLNTNTI 240 PVVVQGELIM SSPSDSSDGF EPNQPAVDSL MEEGLNGAAS QVQSWQIMDE ELSNCVNHSM 300 DSSDCISQTL VDPEKFESGP KHERVEDHAL QDLQEYNHTK MSSLDLQSED LHYQSVLSTL 360 LKSSHQLILG PHFQKFHHES SFVGWKKGGL VKLLKPTGGT SQKLVKKILF EVPRMHLNCI 420 IDSPEDDSIG NGVWRPEADE IGMNHALSER RRRERLNEKF SILKTMVPSL SKEDKVSVLD 480 DAIEYLKELE RRVEELESCR ESTDLEPKTK RKPQDAREGT SDNYGNKKIS SGKKQLINKR 540 KARDMDEVEP EIHHDVSKDS SAGNIAVIMK NKYVLIKIKC PWREGVLLEI MDALSNLHLD 600 SHSVQSSTMD GIISLTIQSM IKCSAPISVA TIKQALQKIA CNC

Sequence ? help Back to Top

Protein Sequence Length: 643 aa Download sequence

MATGPQNEEG VPLPDNLNKR LALAVRSIQW SYAIFWSISS TQPGVLEWEE GYYNGDIKTR  60
KTIQAIELNA DEMGLQRSEQ LRELYDSLSA GETSPQAKRP SAALSPEDLS DAEWYYLVCM  120
SFVFNIGQGL PGRALANGQP IWLYNAHYAD SKVFSRSLLA KSASIQTVVC FPLLGGVIEL  180
GTTDPVVEDY ALIQQVKMSI LEIPCPMASK KSDCSAGNTR KDHGFAYAAV DHDLLNTNTI  240
PVVVQGELIM SSPSDSSDGF EPNQPAVDSL MEEGLNGAAS QVQSWQIMDE ELSNCVNHSM  300
DSSDCISQTL VDPEKFESGP KHERVEDHAL QDLQEYNHTK MSSLDLQSED LHYQSVLSTL  360
LKSSHQLILG PHFQKFHHES SFVGWKKGGL VKLLKPTGGT SQKLVKKILF EVPRMHLNCI  420
IDSPEDDSIG NGVWRPEADE IGMNHALSER RRRERLNEKF SILKTMVPSL SKEDKVSVLD  480
DAIEYLKELE RRVEELESCR ESTDLEPKTK RKPQDAREGT SDNYGNKKIS SGKKQLINKR  540
KARDMDEVEP EIHHDVSKDS SAGNIAVIMK NKYVLIKIKC PWREGVLLEI MDALSNLHLD  600
SHSVQSSTMD GIISLTIQSM IKCSAPISVA TIKQALQKIA CNC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	449	454	ERRRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41315.1	0.0	bHLH family protein