PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON84423.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

HSF

Protein Properties

Length: 487aa MW: 53268.2 Da PI: 4.6405

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON84423.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	113.9	1e-35	172	263	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k++++++d+++++++sws+ +sf+v+d+++f+k++LpkyFkhsnf+SF+RQLn+YgFkkv+ ++ weF+++ F+ gkk+ll++ik PON84423.1 172 FLNKTFQMVDDPDTDSVVSWSQARDSFIVWDSHDFSKNLLPKYFKHSNFSSFIRQLNTYGFKKVDPDR---------WEFANEGFQGGKKHLLKNIK 259 9**************************************************************999.........**************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+++ PON84423.1 260 RRSK 263 87 PP

Sequence ? help Back to Top
Protein Sequence Length: 487 aa Download sequence
MVAVADGCSS GGGGRACYSP LSSTQMPRIW EEHNDVVGAQ NERTHEPVLV VASVKEEDED 60 EQIALSYGFE AGDGGGSSSS SSPSADPPQL SLSPPPSPAP VPINALVEDE TKPVTLVKIK 120 EETIELIDDD DDHDHDTMNE RGYPFNGGCS SSSSLVLPAP MEGLHEAGPP PFLNKTFQMV 180 DDPDTDSVVS WSQARDSFIV WDSHDFSKNL LPKYFKHSNF SSFIRQLNTY GFKKVDPDRW 240 EFANEGFQGG KKHLLKNIKR RSKYNNKHPN GAVASRSGSD PGKSPRLESE IESLKKDQSS 300 LRSEILSLRR EEQDSQNQIT AVEERIRCAE CRQHQMLLFL SKTAINPSIV QLLMQKRRQR 360 KREVIGGGEM GKRRRLLRTG GEGEEEVAIQ SILTGGLPKA ECAAAAPSET AMNEDIGGGG 420 GGGGGGESDM LSVYNVVSDN LLDDVSFLEE ELSINDNKFY HELEDLIEKP RDCGGYSNMT 480 SCIGSML

Sequence ? help Back to Top

Protein Sequence Length: 487 aa Download sequence

MVAVADGCSS GGGGRACYSP LSSTQMPRIW EEHNDVVGAQ NERTHEPVLV VASVKEEDED  60
EQIALSYGFE AGDGGGSSSS SSPSADPPQL SLSPPPSPAP VPINALVEDE TKPVTLVKIK  120
EETIELIDDD DDHDHDTMNE RGYPFNGGCS SSSSLVLPAP MEGLHEAGPP PFLNKTFQMV  180
DDPDTDSVVS WSQARDSFIV WDSHDFSKNL LPKYFKHSNF SSFIRQLNTY GFKKVDPDRW  240
EFANEGFQGG KKHLLKNIKR RSKYNNKHPN GAVASRSGSD PGKSPRLESE IESLKKDQSS  300
LRSEILSLRR EEQDSQNQIT AVEERIRCAE CRQHQMLLFL SKTAINPSIV QLLMQKRRQR  360
KREVIGGGEM GKRRRLLRTG GEGEEEVAIQ SILTGGLPKA ECAAAAPSET AMNEDIGGGG  420
GGGGGGESDM LSVYNVVSDN LLDDVSFLEE ELSINDNKFY HELEDLIEKP RDCGGYSNMT  480
SCIGSML

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	255	261	LKNIKRR
2	356	374	KRRQRKREVIGGGEMGKRR
3	356	375	KRRQRKREVIGGGEMGKRRR
4	360	379	KRRQRKREVIGGGEMGKRRR
5	372	376	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	2e-72	HSF family protein