PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON84366.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

WRKY

Protein Properties

Length: 569aa MW: 63141.9 Da PI: 5.804

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON84366.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	78.3	8.7e-25	135	191	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dg+ WrKYGqK+v gs++pr YY+C + +C+vkkkv+rs+ +++++ei +g Hnh+ PON84366.1 135 EDGFYWRKYGQKQVVGSKYPRIYYKCMHLNCKVKKKVKRSD-EGHITEILHSGVHNHH 191 7*************************************9.*************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 569 aa Download sequence
MEYGCQSPPN SLMEARFGSP QNSGISVTFV DLDKSDVDVD DDFFQYINAS SFSFKPVTNP 60 GSSFCLGAAA SKMTSSGLSQ QSFPTMEEFN QYESTPRTLE PIGVQNQNKN KLQLQADKEG 120 DRDCSAGGGG SITSEDGFYW RKYGQKQVVG SKYPRIYYKC MHLNCKVKKK VKRSDEGHIT 180 EILHSGVHNH HHKPPNPRSA IGSSDSYSPA TEKRCPPKNT LDLPQTNFEA SSIENSQLDL 240 TRSQNAEVQV SLNRSISSDL LNSVVPIQPS YSNIFCDNQA AWPKIKELLK LACQRYRLPL 300 AQTWVPCGHR LFDQDSNSNN NLCAYSISDQ AFYAGTILMQ VFHDVCSKHY LLKGQGIVGE 360 AFVTNKPRFS ADVTSCCRAE YPLSYHTKRL KFRSAVAIPA YWDGSIPPGD RTAPDFVVEF 420 FLPLDCTDVE EQKNMVTSLE SFIALDLCIA AELEPEQESG SKQGGDNGLI PRSVTNLTEG 480 KFSSVAESDT SEEPRHTRCS MKTTDLLAGG LKDAEKKSTT RDSEIAIDSI ALAWILDLDM 540 ALYFVWLSAL WLLISYGCYL PRISLFCGN

Sequence ? help Back to Top

Protein Sequence Length: 569 aa Download sequence

MEYGCQSPPN SLMEARFGSP QNSGISVTFV DLDKSDVDVD DDFFQYINAS SFSFKPVTNP  60
GSSFCLGAAA SKMTSSGLSQ QSFPTMEEFN QYESTPRTLE PIGVQNQNKN KLQLQADKEG  120
DRDCSAGGGG SITSEDGFYW RKYGQKQVVG SKYPRIYYKC MHLNCKVKKK VKRSDEGHIT  180
EILHSGVHNH HHKPPNPRSA IGSSDSYSPA TEKRCPPKNT LDLPQTNFEA SSIENSQLDL  240
TRSQNAEVQV SLNRSISSDL LNSVVPIQPS YSNIFCDNQA AWPKIKELLK LACQRYRLPL  300
AQTWVPCGHR LFDQDSNSNN NLCAYSISDQ AFYAGTILMQ VFHDVCSKHY LLKGQGIVGE  360
AFVTNKPRFS ADVTSCCRAE YPLSYHTKRL KFRSAVAIPA YWDGSIPPGD RTAPDFVVEF  420
FLPLDCTDVE EQKNMVTSLE SFIALDLCIA AELEPEQESG SKQGGDNGLI PRSVTNLTEG  480
KFSSVAESDT SEEPRHTRCS MKTTDLLAGG LKDAEKKSTT RDSEIAIDSI ALAWILDLDM  540
ALYFVWLSAL WLLISYGCYL PRISLFCGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76350.1	8e-42	Nin-like family protein