PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON84301.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | MYB | ||||||||
Protein Properties | Length: 390aa MW: 44165.5 Da PI: 7.6144 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59.3 | 8.3e-19 | 28 | 75 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l+++++ +G g+W++I++ g+ R++k+c++rw +yl PON84301.1 28 RGLWSPEEDEKLIKYITTHGHGSWSSIPKLAGLQRCGKSCRLRWINYL 75 788*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.2 | 1.4e-16 | 81 | 124 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++++eE+ ++d+++ lG++ W+ Ia++++ gRt++++k++w++ PON84301.1 81 KGSFSEEEERTIIDVHRILGNR-WAQIAKHLP-GRTDNEVKNFWNS 124 799*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 390 aa Download sequence |
MLVISESELD QLNRNMVHQC CSKQKVKRGL WSPEEDEKLI KYITTHGHGS WSSIPKLAGL 60 QRCGKSCRLR WINYLRPDLK KGSFSEEEER TIIDVHRILG NRWAQIAKHL PGRTDNEVKN 120 FWNSCIKKKL IAQGLDPNTH NLLNIPSSKS NNTSAKKYYI HNKTTTNFSI AQPKRSTTTT 180 TTTTSISTSS VFSVNSRSNI SHTSMNIKAP ILTLPLVSPP HSYPSNPDDA HHLLQLESSI 240 MSNCTAHDHD QYDHNPNTVC NTTFQENNPT SSTALMESTI SHHSKGKFQS SGSPLNPPGF 300 ERIEETCLWD ISSFDHRKVT KQDEILLQQK RLEKASDEVE RSNINDGQNM EYYAPLETSN 360 FDLIDFPGST VDSGLMYCHL SPMDYVAWNC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12720.1 | 1e-82 | MYB family protein |