PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON83345.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | ERF | ||||||||
Protein Properties | Length: 140aa MW: 15341.8 Da PI: 7.5111 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 66.6 | 4.9e-21 | 13 | 63 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrd + + +r++lg+fgtaeeAa+a+++a+ +++g PON83345.1 13 KYRGVRRRP-WGKFAAEIRDSTR---HgARVWLGTFGTAEEAARAYDRAAYAMRG 63 8********.**********422...25*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 140 aa Download sequence |
MDQEKDNSGG GVKYRGVRRR PWGKFAAEIR DSTRHGARVW LGTFGTAEEA ARAYDRAAYA 60 MRGPLAILNF PEEYPLANPG QSSSSTSATF SSSTSSMRVA GSSSSSSSSQ QGKQVIEFEY 120 LDDKLLEELL DYDDKNNKKG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23220.1 | 4e-19 | ERF family protein |