PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON83049.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

Trihelix

Protein Properties

Length: 447aa MW: 51366.4 Da PI: 6.6777

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON83049.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	84.6	1.3e-26	121	217	1	85
trihelix 1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdql 85 +Wt+++v++Li+a+++++e+ + ++ +kk++W++vsk+m+erg+++sp+qC++k+++lnkryk+++++ +++ +++++++ +++d + PON83049.1 121 KWTDKMVKLLITAVSYIGEDAGPDCsvvgrrkfsvlQKKGKWKSVSKVMAERGYHVSPQQCEDKFNDLNKRYKRLNDMLGRGtSCQVVENPALLDVI 217 7*******************99888999999999********************************************569999888887765 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MEGHLSHGGM IPSGASYGGL DLQGSMRAHH QGQHPHNIHQ QHHPHQCQTS SVHPSIHEGF 60 PLTMGTLHNC GQTMSMVDYN KGERSKNSAS EEDEPSFTEE GVDGHNEVSK GKKGSLWQRV 120 KWTDKMVKLL ITAVSYIGED AGPDCSVVGR RKFSVLQKKG KWKSVSKVMA ERGYHVSPQQ 180 CEDKFNDLNK RYKRLNDMLG RGTSCQVVEN PALLDVIDYL TEKEKDDVRK ILSSKHLFYE 240 EMCSYHNGNR LHLPHDPALQ HSLQLALRSR DDHDNEDVRK HQHDDHDEED QEIETDDRED 300 LEDNNASHGD RGIYGLLGDS GKRFRPGQGC EDISFGNSLN IQDCNKSSYS QALFAQTDIN 360 QALPDGTKVA WLQKQWIESR FLQLEERKLQ IQVEMLELEK QRLKWQRFTK KRDRELEKLK 420 MDNERMKLEN ERMALELKRK EMGGSFT

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MEGHLSHGGM IPSGASYGGL DLQGSMRAHH QGQHPHNIHQ QHHPHQCQTS SVHPSIHEGF  60
PLTMGTLHNC GQTMSMVDYN KGERSKNSAS EEDEPSFTEE GVDGHNEVSK GKKGSLWQRV  120
KWTDKMVKLL ITAVSYIGED AGPDCSVVGR RKFSVLQKKG KWKSVSKVMA ERGYHVSPQQ  180
CEDKFNDLNK RYKRLNDMLG RGTSCQVVEN PALLDVIDYL TEKEKDDVRK ILSSKHLFYE  240
EMCSYHNGNR LHLPHDPALQ HSLQLALRSR DDHDNEDVRK HQHDDHDEED QEIETDDRED  300
LEDNNASHGD RGIYGLLGDS GKRFRPGQGC EDISFGNSLN IQDCNKSSYS QALFAQTDIN  360
QALPDGTKVA WLQKQWIESR FLQLEERKLQ IQVEMLELEK QRLKWQRFTK KRDRELEKLK  420
MDNERMKLEN ERMALELKRK EMGGSFT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	0.0	Trihelix family protein