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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON82850.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | NF-YC | ||||||||
Protein Properties | Length: 139aa MW: 15744 Da PI: 6.8036 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 48.3 | 2.1e-15 | 6 | 91 | 13 | 97 |
NF-YC 13 atdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd.ifdflvdivp 97 ++ + + e+P r+kki+k d+d+k++ +ea l+s + +lf+ l+ rs a e+kr+ +k + aav+r + + dfl+d p PON82850.1 6 EETMIRPEFPNGRVKKIMKLDQDIKKVNSEALFLISCSTQLFLGFLAERSADVATEKKRKVVKLEHVRAAVKRHQpTSDFLLDSLP 91 45566789****************************************************************976489*****987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 139 aa Download sequence |
MAEEEEETMI RPEFPNGRVK KIMKLDQDIK KVNSEALFLI SCSTQLFLGF LAERSADVAT 60 EKKRKVVKLE HVRAAVKRHQ PTSDFLLDSL PPPSQPSDHP PSDRNRSVPV AEKPVPAGTR 120 RIDDFFRKPA NEAPIEIDE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43250.1 | 5e-39 | NF-YC family protein |