PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON82600.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

G2-like

Protein Properties

Length: 350aa MW: 39950.9 Da PI: 8.4698

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON82600.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.2	1.9e-33	73	126	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH++Fv+ave+LGG+++AtPk +l++m+vkgLt++hvkSHLQ+YR+ PON82600.1 73 PRLRWTPDLHRCFVHAVERLGGEDRATPKMVLQIMDVKGLTISHVKSHLQMYRS 126 8****************************************************7 PP
2	Myb_DNA-binding	48.2	2.4e-15	74	125	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++ +v+av++lGg+ t+k + + m kg+t ++ks++q+y+ PON82600.1 74 RLRWTPDLHRCFVHAVERLGGEdraTPKMVLQIMDvKGLTISHVKSHLQMYR 125 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MVKEADDNYQ QSPLEGYSLA SSFENGEQHP QSPKSCIRSP SSNSQRRMDH HDNLTEISLK 60 SPVVRPYMRS KMPRLRWTPD LHRCFVHAVE RLGGEDRATP KMVLQIMDVK GLTISHVKSH 120 LQMYRSMKHE QLIQATMAAK ENDKAVVFQH SKYSHLDTNV NICQQNYFQE NNICHGLANF 180 SVPYQNYGAC NREEELDLKI NIPGQWKDKQ DMRNGKKVIM RESSLCSEVS SKRWEYWEQK 240 PNSYIIFKDL LKRCTAHHEE SIINEKEKDQ SLLLNRSASM KGNHHKLEDN KAGQISSSST 300 TNTTAKRVLD DAAVSLSLNS NTNSRLLWLT KAGSGTNSDA NDVSLELTLA

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MVKEADDNYQ QSPLEGYSLA SSFENGEQHP QSPKSCIRSP SSNSQRRMDH HDNLTEISLK  60
SPVVRPYMRS KMPRLRWTPD LHRCFVHAVE RLGGEDRATP KMVLQIMDVK GLTISHVKSH  120
LQMYRSMKHE QLIQATMAAK ENDKAVVFQH SKYSHLDTNV NICQQNYFQE NNICHGLANF  180
SVPYQNYGAC NREEELDLKI NIPGQWKDKQ DMRNGKKVIM RESSLCSEVS SKRWEYWEQK  240
PNSYIIFKDL LKRCTAHHEE SIINEKEKDQ SLLLNRSASM KGNHHKLEDN KAGQISSSST  300
TNTTAKRVLD DAAVSLSLNS NTNSRLLWLT KAGSGTNSDA NDVSLELTLA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02060.1	4e-34	G2-like family protein