PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON82210.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 329aa    MW: 36929.7 Da    PI: 6.7986
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON82210.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.91.8e-08158198954
                 HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  PON82210.1 158 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIRYVKFL 198
                 699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MDINNHTAYY NNKLITNNSS SAAYWDLQTA AMEHHHNILH PPHHHHHHHE IPTTDHSSLW  60
PNYPHLQHQT PSSSASSSSS TLLMITHDHH NHHVVLEDHK EDQDDPADDD DDQEELGAMK  120
EMMYKIAAMQ PVDIDPASIR KPKRRNVRIS DDPQSVAARH RRERISERIR ILQRLVPGGT  180
KMDTASMLDE AIRYVKFLKR QIRLLQSNDH DHDHIRRRQQ PQQQGLVLIS STSTNNCTST  240
TTQPCLASSG DINWGAQGQY GSVLTTGPPG FGNFSGGGGG SGTSLLGESF CNMGFDHDQG  300
KEEGPGERER RRGGHDILGK VQKELLGYC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G09750.11e-40bHLH family protein