PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON82154.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ZF-HD
Protein Properties Length: 298aa    MW: 32484.6 Da    PI: 8.2563
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON82154.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer102.23.4e-3272128259
  ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                  + v+Y+eClkNhAa++G++a+DGCgEfmps geegt++alkC+AC+CHRnFHR+e e 
   PON82154.1  72 KVVKYRECLKNHAAAMGANATDGCGEFMPS-GEEGTIEALKCSACNCHRNFHRKEIEG 128
                  5799*************************9.999********************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MDLSSHQEGD IPIPINSTPY GDGGHGHGHL IHHDPSPHNH IIPSSAVPQI PSNNGSSLPT  60
SLEDHVPYNN KKVVKYRECL KNHAAAMGAN ATDGCGEFMP SGEEGTIEAL KCSACNCHRN  120
FHRKEIEGEP SAYDQFHHNS NTPHLSRMAA GRKFILGHHK GMLGPDSLGY PTATGAFIPS  180
RTGPVPHHMI MSYNMGSLPS ESDEQEDVGC AAGAGGGGGG SVACRPPQLV KKRFRTKFTQ  240
EQKEKMLNFA EKVGWKIQKQ EESVVQQFCQ EIGVKRRVLK VWMHNNKHNL AKKNAPSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14440.11e-68ZF-HD family protein