PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON82116.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 326aa    MW: 36545.3 Da    PI: 6.5186
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON82116.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH49.39e-163382255
                HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                r +h+e E+rRR++iN++f+ Lr+l+P++    ++K +Ka+ L + +eY++ Lq
  PON82116.1 33 RSKHSETEQRRRSKINERFQILRDLIPQN----DQKRDKASFLLELIEYVQFLQ 82
                899*************************9....9*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MVDSSRGHQE EFEDDEEVTH KVKVDGKSRE KNRSKHSETE QRRRSKINER FQILRDLIPQ  60
NDQKRDKASF LLELIEYVQF LQEKLNMYEG SYQGWSAEPT KLLPWRNQHA PTESFADHTQ  120
VVKNGSDLQN NVVSPSMPPN PQNSLESDMG SAMVYKTLDH FPGSATQSVP PNAQQITMLD  180
SIGRRGVPSQ ALHESVSDEG DVDRLPQPLP ESWQGGHTTV SSVLNHAPSI KEDKSGRVRT  240
SNSYSQGVLD TLTQALQSSG VDLSQTRISV QINVANRTES GLTSMASSSK DHANQSLNSQ  300
VMSHTQVTSA DDKFERAHKR LRINEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G38860.11e-54bHLH family protein