PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON82109.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

G2-like

Protein Properties

Length: 393aa MW: 43903 Da PI: 7.6521

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON82109.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	82.1	6e-26	240	294	2	56
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 +r+ WtpeLH++F++a+ + +e+AtPk+i+elm+vk+Lt+++vkSHLQkYRl+ PON82109.1 240 NRRTWTPELHAKFIQAMGRFKSPEVATPKQIRELMNVKDLTNDQVKSHLQKYRLH 294 799**************************************************97 PP
2	Myb_DNA-binding	38.1	3.5e-12	241	292	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r WT+e++ ++++a ++ ++ t+k I + m+ k +t q+ks++qky+ PON82109.1 241 RRTWTPELHAKFIQAMGRFKSPevaTPKQIRELMNvKDLTNDQVKSHLQKYR 292 678************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
MGSNSNSSKV LELRLSLKPS YVPKTIRDLL SDLDKIDNDV EKKLSVLNDY LNKYKEELSR 60 VEVLKRDLPQ CMLLLMDAIE IIKDEITKSL TKKTQGGESE VYDHDRELQR RVSEFLACKK 120 RTYENDRHEL QMKNIINNAE NKNINDLLTS SLISPPWPKC YHDQFKTIQD SGNKSKNPKI 180 GSDVLNGGTS FGSRSNNNDD IVPAFGIGSR GGGGVKYDQL QPPSAVAAEV VLDPIWRNTN 240 RRTWTPELHA KFIQAMGRFK SPEVATPKQI RELMNVKDLT NDQVKSHLQK YRLHLRGLPR 300 SSTTDQTNSS DYRPTASAQY DHVYYRGLNN WFNPSTTAAA ASHSNSAAVQ GALLTTAASV 360 DNEENGVVDN DEPADRNFGG WIGDRFGASG DGA

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

MGSNSNSSKV LELRLSLKPS YVPKTIRDLL SDLDKIDNDV EKKLSVLNDY LNKYKEELSR  60
VEVLKRDLPQ CMLLLMDAIE IIKDEITKSL TKKTQGGESE VYDHDRELQR RVSEFLACKK  120
RTYENDRHEL QMKNIINNAE NKNINDLLTS SLISPPWPKC YHDQFKTIQD SGNKSKNPKI  180
GSDVLNGGTS FGSRSNNNDD IVPAFGIGSR GGGGVKYDQL QPPSAVAAEV VLDPIWRNTN  240
RRTWTPELHA KFIQAMGRFK SPEVATPKQI RELMNVKDLT NDQVKSHLQK YRLHLRGLPR  300
SSTTDQTNSS DYRPTASAQY DHVYYRGLNN WFNPSTTAAA ASHSNSAAVQ GALLTTAASV  360
DNEENGVVDN DEPADRNFGG WIGDRFGASG DGA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13300.1	3e-22	G2-like family protein