PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON82042.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 365aa    MW: 39169.4 Da    PI: 8.5743
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON82042.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.26e-13135178855
                 HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  Er RR+++++ f++L  llP++     +K +K++i+ +Av+YI+ Lq
  PON82042.1 135 TERERRKKMRNMFANLHALLPQL----PPKADKSTIVDEAVNYIRTLQ 178
                 6*********************6....39******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    
MGTESSLLQW ENHSWPNNLS NSDNYSSGGA AATGGDEEEK SAGKKKMAAS NSDGCGGGGR  60
KGGAVAGKEL GLVQQSTSNN KKRSRGGQGV GSKNGKKTST ASTTGDQLVK DGKGGGGSGS  120
GSGGGESDHE IHIWTERERR KKMRNMFANL HALLPQLPPK ADKSTIVDEA VNYIRTLQQT  180
LHKLQKQKLE KLQGPTNIIT PSSTFNVGET SINNINNPQP KLAYETREAF LADQGSCNDL  240
VSMGNNCNNN NNNNPNSNNS LFPVIFQTWT SSNVVLNICG DEAHISVCSP KKPGLFSSIC  300
YVLEKHKITL ISAQISSDAS RNMYMIHAHY ATSSRSGSDQ FLEAFNSVEE VFKQAVGEMM  360
FWVSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.11e-45bHLH family protein