PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON81987.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

MYB

Protein Properties

Length: 289aa MW: 32240.2 Da PI: 10.0607

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON81987.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.5	5.6e-17	20	65	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ede+l ++v+++G+ +W+ Ia+++ gR++k+c++rw++ PON81987.1 20 RGHWRPGEDEKLRELVERYGPQNWNFIAEHLE-GRSGKSCRLRWYNQ 65 899***************************.**********96 PP
2	Myb_DNA-binding	51.5	2.4e-16	72	116	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++T+eE+e+l+ a++ +G++ W+ Ia+++ gRt++ +k++++ + PON81987.1 72 KKPFTEEEEERLLAAHRIYGNK-WACIAKYFH-GRTDNAVKNHYHVV 116 689*****************.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 289 aa Download sequence
MGKSSSSISS DHGGGKNCYR GHWRPGEDEK LRELVERYGP QNWNFIAEHL EGRSGKSCRL 60 RWYNQLDPNI NKKPFTEEEE ERLLAAHRIY GNKWACIAKY FHGRTDNAVK NHYHVVMARR 120 KRERFSSSSQ LIHHHSNHSH QQHKQPADIS KGSYNNPKLG FVKFQAAGLD QKMGIWGILS 180 TSSSLSSSPS PSLSVSASST TFTRDSTSLD HVLGLGSPKA LIPNLINRPK DVAIINPLGL 240 LNSGNVGYGI EEVGNKSKLQ VRVGMASDKE HKEHQVPFID FLGVGFISS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33450.1	5e-59	MYB family protein