PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON81762.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family GRAS
Protein Properties Length: 506aa    MW: 56726 Da    PI: 6.7462
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON81762.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS332.11e-1011304972374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                  +lLlecA a+s ++l +a++++ +l ++asp++ +p +R++ayf++A+a+r+++s+ +++    +s+ +  n+ +  aa+++f+++sP++kf+h+t N
  PON81762.1 130 MTLLLECAVAISVDNLGEAHRMILELTQMASPYApSPAERVVAYFAKAMASRVVNSWLGVV---LCSPLPLVNHRSLHAAFQAFNNASPFVKFAHFTSN 225
                 579*******************************9********************999988...45555555688888999****************** PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgv.pfefnvlvak...rledlelee 193
                 qaIle++++ +r+H+iD+di+qGlQWpaL++ La+R+egpp ++R+Tgvgs    s+e l++tg+ L++fA++lg+ +fef+++v +    l ++++++
  PON81762.1 226 QAILESFHRRDRLHVIDLDIMQGLQWPALFHILATRAEGPPsHVRVTGVGS----SQELLSQTGQHLSSFAKRLGIsSFEFHPVVRNpnsGLLNVDVSA 320
                 *************************************99888*********....99*******************55*****96654235777899** PP

        GRAS 194 LrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgr 292
                 +rv++gE+laV++    h l+d +++       +++lv +l+P+++++veq+++  s+sFl+rf+ +l+yys++fdsl a l++++ +r+ vE+ ll r
  PON81762.1 321 FRVRRGETLAVHWLR--HCLYDATGPDWR----TMRLVEELRPRIFTLVEQDVSQ-SGSFLDRFVGSLHYYSTMFDSLGAYLGTDDPNRHRVEHCLLYR 412
                 *************99..888877777777....********************98.899**************************************** PP

        GRAS 293 eivnvvacegaerrerhetlekWrerlee..aGFkpvplsekaakqaklllrkvk.sdgyrve.eesgslvlgWkdrpLvsvSaWr 374
                 ei n++a  g  r   +e+l+ Wr+ l++   G+++v++s + ++qa+l+l++++   gy++    +g+l lgWkd  L+++SaW+
  PON81762.1 413 EINNMLAIGGPGR-SGEEKLRDWRSELGRrnGGLGQVAMSANCMAQAQLILNMYSpAYGYTLVqGTDGTLRLGWKDTCLYTASAWT 497
                 ***********95.55678********76558****************************98725688999**************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 506 aa     Download sequence    
MKAGTFEMVH GALDMIQPHH HHEYLNSSTA SNIGFFPVQT SINQFPKPIN SELSEWVEQI  60
TKQLIDDAPE TPSVETFPAT SADDNSNFVQ PTSFSAEYFR PRKIPRTVEP SDHNHNHDHD  120
HQEQSLTQMM TLLLECAVAI SVDNLGEAHR MILELTQMAS PYAPSPAERV VAYFAKAMAS  180
RVVNSWLGVV LCSPLPLVNH RSLHAAFQAF NNASPFVKFA HFTSNQAILE SFHRRDRLHV  240
IDLDIMQGLQ WPALFHILAT RAEGPPSHVR VTGVGSSQEL LSQTGQHLSS FAKRLGISSF  300
EFHPVVRNPN SGLLNVDVSA FRVRRGETLA VHWLRHCLYD ATGPDWRTMR LVEELRPRIF  360
TLVEQDVSQS GSFLDRFVGS LHYYSTMFDS LGAYLGTDDP NRHRVEHCLL YREINNMLAI  420
GGPGRSGEEK LRDWRSELGR RNGGLGQVAM SANCMAQAQL ILNMYSPAYG YTLVQGTDGT  480
LRLGWKDTCL YTASAWTCTS TTTSNY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.11e-121GRAS family protein