PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON81731.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

MYB

Protein Properties

Length: 281aa MW: 32257.7 Da PI: 6.0065

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON81731.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.7	1.1e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +l+ +++++G g+W++ ++ g+ R++k+c++rw +yl PON81731.1 14 KGPWTPEEDHILISYIQRYGHGNWRALPKQAGLLRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	52.1	1.6e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T +E+e +++++++lG++ W++Ia++++ gRt++++k+ w+++l PON81731.1 67 RGNFTRDEEETIIKLHEMLGNR-WSAIAARLP-GRTDNEIKNVWHTHL 112 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 281 aa Download sequence
MVRAPCCEKM GLKKGPWTPE EDHILISYIQ RYGHGNWRAL PKQAGLLRCG KSCRLRWINY 60 LRPDIKRGNF TRDEEETIIK LHEMLGNRWS AIAARLPGRT DNEIKNVWHT HLKKRLTQNH 120 VVQKTKRHHN HEPKDEPHDH QVLPTNFSSD AKYDIAEDRP VSPPQSSSSS TDISSVTTST 180 DDDHNNNTNN GSIKSDSPDN FSEMDEDFWS EVFSSENNYS KAVVDDFSAI SADSHQLQYS 240 VSPLVTIEPD HALNSNMYND EDMDFWNNVF TRAADLPELL L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31180.1	2e-79	MYB family protein