PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON81604.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

TCP

Protein Properties

Length: 371aa MW: 39555.3 Da PI: 6.6951

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON81604.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	115	9.7e-36	22	120	2	87
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.........................ssssasecea 75 +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak+ai++l+++ + PON81604.1 22 TGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKTAIDKLAELppwhptgnpatepdphaaaggtaemG--------- 111 79**************************************************************99888766654433332222222220......... PP TCP 76 esssssasnsss 87 +++++ss PON81604.1 112 ---IAAEQSESS 120 ...222111111 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MGMKGVGGEI VQVQGGHIVR STGRKDRHSK VYTAKGPRDR RVRLSAHTAI QFYDVQDRLG 60 YDRPSKAVDW LIKKAKTAID KLAELPPWHP TGNPATEPDP HAAAGGTAEM GIAAEQSESS 120 GYNFQLHRQM GSTENPDNGS GFIPPQALDS DAIADTMKSF FPTSSATSSM NFQTYPTDII 180 HRAADPTQDL GLSLHSFQDH AMVHGQSQGD GGGADHALPH DHHHHHGLFA PGSGPVGYGS 240 GYQRMLAWGG DEGGENRGFG FGSAPPLQQG ALLGQGSTAP FGTQRGTLQS SFSPLVRAWD 300 DLPMASQRPQ PMHHSSSSLS SSSSIFGTRF TSDGSPVFCI PARIHGEDDD NEHGVVSERP 360 SSSSSPNSNH H

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MGMKGVGGEI VQVQGGHIVR STGRKDRHSK VYTAKGPRDR RVRLSAHTAI QFYDVQDRLG  60
YDRPSKAVDW LIKKAKTAID KLAELPPWHP TGNPATEPDP HAAAGGTAEM GIAAEQSESS  120
GYNFQLHRQM GSTENPDNGS GFIPPQALDS DAIADTMKSF FPTSSATSSM NFQTYPTDII  180
HRAADPTQDL GLSLHSFQDH AMVHGQSQGD GGGADHALPH DHHHHHGLFA PGSGPVGYGS  240
GYQRMLAWGG DEGGENRGFG FGSAPPLQQG ALLGQGSTAP FGTQRGTLQS SFSPLVRAWD  300
DLPMASQRPQ PMHHSSSSLS SSSSIFGTRF TSDGSPVFCI PARIHGEDDD NEHGVVSERP  360
SSSSSPNSNH H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	5e-56	TCP family protein