PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON81383.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

MYB

Protein Properties

Length: 273aa MW: 30552 Da PI: 8.5777

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON81383.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.8	9.2e-17	13	60	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++ Ed++l+d+++ +G g+W+++++ g++R++k+c++rw +yl PON81383.1 13 KGAWSKNEDQKLIDYIATHGEGCWRSVPKAAGLHRCGKSCRLRWINYL 60 79********************************************97 PP
2	Myb_DNA-binding	52	1.6e-16	66	110	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++ ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++ PON81383.1 66 RGNFGQDEEDLIIKLHALLGNR-WSLIAGRLP-GRTDNEVKNYWNSH 110 899*****************.*****.*********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MRKPCCDKEG TNKGAWSKNE DQKLIDYIAT HGEGCWRSVP KAAGLHRCGK SCRLRWINYL 60 RPDIKRGNFG QDEEDLIIKL HALLGNRWSL IAGRLPGRTD NEVKNYWNSH IRKKLIKIGI 120 DPNNHRLKNH NLVPAATSNK LAPPDHPPHT DNHKENISAA SSDQKSSGST NHACKNTSKS 180 ARERKNNYDR SRPANSDAAS CLDQDQASAC AATSDHLNLE LTIAFPSPDD DHGQDDRLKP 240 AEEIKSENNE SSKATEMEIG NNIFTFPTLV LFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22640.1	3e-75	MYB family protein