PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON81013.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 289aa    MW: 30568.1 Da    PI: 10.2531
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON81013.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.22.7e-20126175255
         AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr ++ +grW AeIrd       r r++lg+f+taeeAa+a++aa+++l+g
  PON81013.1 126 NYRGVRKRP-WGRWSAEIRDrI----GRCRHWLGTFDTAEEAARAYDAAARRLRG 175
                 59*******.**********32....25*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MPEPLPPETF RILAETPSFY GSYWGTHLAI PTFSGQIAEP IVSAAAATSS PSQLGGSNFE  60
EATVQQSPLP LDGIAAVVGE YVLFGDKTTE RTGPRPEISE LVSGKKASTS SNNSNANNNV  120
PGQKKNYRGV RKRPWGRWSA EIRDRIGRCR HWLGTFDTAE EAARAYDAAA RRLRGSKART  180
NFEIPSVLPL MSSSSSSGGG SSACSGRVGK RSRAAAAQNG SSRRKCSVVT SAAHLFSNIS  240
NNSNKIVAPV VSTGNYNNFV ELDLKLGMID SGINANSTSA SASSPLVTI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.12e-27ERF family protein