PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON80404.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | C2H2 | ||||||||
Protein Properties | Length: 563aa MW: 61435.4 Da PI: 9.1597 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16 | 3.5e-05 | 60 | 82 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H PON80404.1 60 FICEICNKGFQRDQNLQLHRRGH 82 89*******************88 PP | |||||||
2 | zf-C2H2 | 12.9 | 0.00034 | 137 | 159 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +++ PON80404.1 137 WKCEKCSKKYAVQSDWKAHTKVC 159 58*****************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 563 aa Download sequence |
MVLAPPSEGL LKNQIQTLTL TLIRIHQLIR RREIYLETQA NPDAEVIALS PKSLMATNRF 60 ICEICNKGFQ RDQNLQLHRR GHNLPWKLRQ RTNKDVVRKK VYVCPEKSCV HHDPSRALGD 120 LTGIKKHFSR KHGEKKWKCE KCSKKYAVQS DWKAHTKVCG TREYKCDCGT LFSRKDSFIT 180 HRAFCDALAE ENARFGTTAV PNTNILPSFI NNNINNPQTA ASRMTHPHLS PIFQPEFGSE 240 SVANFGSNAT GDIRPRLPLW LDPSNSHQLN SNNIPFLSAT GGNSPSVGGG FPELLQTAAA 300 TATLFGGQPS SAPPQISHHQ WLNKFSSAHD HQGATTFPTM SSSLLPPPGL KEEEETKGNN 360 IKNSISLSES MMTTTSSLHP NNQSPQLQGP APHMSATALL QKAAQMGSTR SNNASSFSGS 420 AFGLISSLSS SSSNSHKQVL FRQPVNHQST AAENNFNDLV NSLQAASSDN ANNNNNNNNN 480 GPAAVLSSPS SFNLKQAAAA QSLSANNNEN HDIDEHSLTR DFLGVGGDGH HIHGNGSNFF 540 QQELEKFASM GSAMNLSQFS GHH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 87 | 100 | KLRQRTNKDVVRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60470.1 | 5e-94 | C2H2 family protein |