PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON80325.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | NF-YB | ||||||||
Protein Properties | Length: 178aa MW: 20279.9 Da PI: 8.312 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 162.8 | 4.8e-51 | 45 | 139 | 3 | 97 |
NF-YB 3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 +++r+lPianv+rimk++lP nakisk+aket+qecvsef+sfvt+easdkc++e+rkt+ngdd++wala lGf+dy+ p+k yl++yre e ++ PON80325.1 45 QEQRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFVSFVTGEASDKCRKERRKTVNGDDVCWALAALGFDDYAGPMKRYLHRYREQEIDR 139 5789**************************************************************************************99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MYCSYFFSLQ YLIWRRNMVD NSNNITGAAS SKINGSEGVI KSLDQEQRLL PIANVGRIMK 60 QILPPNAKIS KEAKETMQEC VSEFVSFVTG EASDKCRKER RKTVNGDDVC WALAALGFDD 120 YAGPMKRYLH RYREQEIDRA IQEKARSSAQ ANHNLRLNEA NRHLRGSIDE VNDGTEVM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47810.1 | 2e-54 | NF-YB family protein |