PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON80262.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | bHLH | ||||||||
Protein Properties | Length: 232aa MW: 25877 Da PI: 10.172 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 31.2 | 3.9e-10 | 79 | 123 | 7 | 55 |
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 e Er RR ++N++++ L +l+P + +K + +L ++eYIk+L+ PON80262.1 79 EKERGRRLKMNESLAILESLVPGlL-----PKTTREKVLHSTIEYIKYLE 123 78*********************55.....89999999**********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MKNEGKPKVK EELNKEEEEL NKLVLGIMEG YSDSAIPPLS HFKPLLESTI VAQQGSSSRK 60 RARTKSSSSA QECRAESLEK ERGRRLKMNE SLAILESLVP GLLPKTTREK VLHSTIEYIK 120 YLEEKKKMLE KLKESSGPMA PKGRLALPCT RSSRNLSVTV TFSGNLAFFG IQTPKRQGLV 180 TQIFMVFHKH MAEVLAANVV INHSQLTLTV TAFVDGNGSN TVEEIKRDIL IL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49770.1 | 4e-07 | bHLH family protein |