PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON80255.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

SBP

Protein Properties

Length: 820aa MW: 91745.6 Da PI: 6.9506

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON80255.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	114.8	4.9e-36	143	219	1	77
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +Cqv+ C a+++e+k yhrrh+vC ++++a++v+++g+++r+CqqC++fh+ls+fDe+krsCrr+L++hn+rrrk + PON80255.1 143 RCQVPTCGANIKELKGYHRRHRVCLKCANAATVVINGESKRYCQQCGKFHMLSDFDEGKRSCRRKLERHNRRRRKIE 219 6**************************************************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 820 aa Download sequence
MEEASPSLSQ SPPQDWEQLK DSSEMEMEVG HAPLLPDEAG SNWDWGDLLD FTVDDDLAIQ 60 WDSSPVQNHP VPVQSEPPGQ DDPDPSRVRK RDPRVTCSNF MAGRVPCACP EVDEKLMELE 120 EEAAGHDKKR TRTTTRSPAG VARCQVPTCG ANIKELKGYH RRHRVCLKCA NAATVVINGE 180 SKRYCQQCGK FHMLSDFDEG KRSCRRKLER HNRRRRKIEP KRPTEKECLG DLQSEDVSGD 240 VEAGKDCSQL SSQKVQKETC VESEGGHISP LHTPPDPKDV QSDGFISLVD SGETQMDAGK 300 YNSKHGVSLS SCDNRSAYSS VCPTGRISFK LYDWNPAEFP RRLRHQIFQW LASMPVELEG 360 YIRPGCIILT VFVAMPSFMW KKLSEDPISY VHDFVVAPGG MLSGRGNMLV YLNNTLLHVV 420 KGGSSVIKAK VNVRAPRLHY VHPICFEAGQ PMEFVACGSN LLQPKLRFLL SLSGKYLAYD 480 YNPEYTHFQT EGSTASDFDH QFYRICVPHT EPNCFGPLFI EVENEAGLSN FIPVLIGDKE 540 TCSELKVIRQ RLNESLFSDG PYFSSTGSLS KSWEVSSQRK TVFSEVILDI AWLLKKPGSE 600 NFQQITTSQV QRINYLLNFL ISIESTTILE KILRNLLTVM DKMKLKDVRN GIHDADLRAL 660 QKYVDHAQRL CCQKLQKIGG LGPHTRNFIL VEDPVCKTCS QNDACSDASF PIQDTEILVH 720 GNLGNVTGST CNDTGESIPL LKEKLGLKSD HIVEWPIKAT SCTTSAEVLV SHRRAILRFH 780 PTLCLIATVA VCLGICSVLF HPYKVSDIAV SIRRCLLNKL

Sequence ? help Back to Top

Protein Sequence Length: 820 aa Download sequence

MEEASPSLSQ SPPQDWEQLK DSSEMEMEVG HAPLLPDEAG SNWDWGDLLD FTVDDDLAIQ  60
WDSSPVQNHP VPVQSEPPGQ DDPDPSRVRK RDPRVTCSNF MAGRVPCACP EVDEKLMELE  120
EEAAGHDKKR TRTTTRSPAG VARCQVPTCG ANIKELKGYH RRHRVCLKCA NAATVVINGE  180
SKRYCQQCGK FHMLSDFDEG KRSCRRKLER HNRRRRKIEP KRPTEKECLG DLQSEDVSGD  240
VEAGKDCSQL SSQKVQKETC VESEGGHISP LHTPPDPKDV QSDGFISLVD SGETQMDAGK  300
YNSKHGVSLS SCDNRSAYSS VCPTGRISFK LYDWNPAEFP RRLRHQIFQW LASMPVELEG  360
YIRPGCIILT VFVAMPSFMW KKLSEDPISY VHDFVVAPGG MLSGRGNMLV YLNNTLLHVV  420
KGGSSVIKAK VNVRAPRLHY VHPICFEAGQ PMEFVACGSN LLQPKLRFLL SLSGKYLAYD  480
YNPEYTHFQT EGSTASDFDH QFYRICVPHT EPNCFGPLFI EVENEAGLSN FIPVLIGDKE  540
TCSELKVIRQ RLNESLFSDG PYFSSTGSLS KSWEVSSQRK TVFSEVILDI AWLLKKPGSE  600
NFQQITTSQV QRINYLLNFL ISIESTTILE KILRNLLTVM DKMKLKDVRN GIHDADLRAL  660
QKYVDHAQRL CCQKLQKIGG LGPHTRNFIL VEDPVCKTCS QNDACSDASF PIQDTEILVH  720
GNLGNVTGST CNDTGESIPL LKEKLGLKSD HIVEWPIKAT SCTTSAEVLV SHRRAILRFH  780
PTLCLIATVA VCLGICSVLF HPYKVSDIAV SIRRCLLNKL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	205	216	RRKLERHNRRRR
2	206	223	RKLERHNRRRRKIEPKRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18830.1	0.0	SBP family protein