PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON80156.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | NF-YC | ||||||||
Protein Properties | Length: 254aa MW: 28233.8 Da PI: 6.8922 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 176.3 | 3e-55 | 81 | 184 | 1 | 101 |
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 ql++fw++q ie+++dfknh+lPlarikki+kadedv+misaeaPv++++ace+fileltlrsw+h+ee+krrtl+k+diaaa+trtdifdflvdiv PON80156.1 81 QLRTFWASQyqeIEQTSDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEESKRRTLQKNDIAAAITRTDIFDFLVDIV 179 89*****99889*************************************************************************************** PP NF-YC 97 prdel 101 pr++l PON80156.1 180 PREDL 184 **987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MDQQGHRQRA AMAAVGSGAQ AQYGVNPYQS NKMMGPSSAG SVGLLQSPTQ PAGPSASPQL 60 AQHQLAYQHI HPQQQEQLQQ QLRTFWASQY QEIEQTSDFK NHSLPLARIK KIMKADEDVR 120 MISAEAPVIF ARACEMFILE LTLRSWNHTE ESKRRTLQKN DIAAAITRTD IFDFLVDIVP 180 REDLKDEVLA SVPRGSLPVP GPADGVPYYY ASPVGPPGMI VGKPVMDQAV YGQQTRSYMN 240 QPTWPHQQQP PNDS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 154 | 160 | RRTLQKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08970.3 | 4e-85 | NF-YC family protein |