PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON79979.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family HSF
Protein Properties Length: 430aa    MW: 49550.9 Da    PI: 4.6651
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON79979.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind102.53.8e-32391652101
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTT........................ CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekksks........................ 74 
                   Fl+k+yei+ed+++++++sws+ +nsfvv+++++fa ++Lp+yFkh+nf+SFvRQLn+Y   +v  + k++ +                        
    PON79979.1  39 FLNKTYEIVEDPATNDVVSWSRGNNSFVVWEPQNFAMTLLPRYFKHNNFSSFVRQLNTYLIAMVLYNFKHNLKlceaaqylciqlveyafkieikgf 135
                   9***************************************************************999999888999999****99999998888776 PP

                   ...XTTSEEEEESXXXXXXXXXXXXXXXXX CS
  HSF_DNA-bind  75 ...kekiweFkhksFkkgkkellekikrkk 101
                      +++ weF+++ F +g+k+ll++i+r+k
    PON79979.1 136 rkvDPDRWEFANEGFLRGQKHLLRNIRRRK 165
                   65449***********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    
MSMNPHRGRR VKEEFIAGAA ADPAPQPMEG LHDAGPPPFL NKTYEIVEDP ATNDVVSWSR  60
GNNSFVVWEP QNFAMTLLPR YFKHNNFSSF VRQLNTYLIA MVLYNFKHNL KLCEAAQYLC  120
IQLVEYAFKI EIKGFRKVDP DRWEFANEGF LRGQKHLLRN IRRRKGIQPP QPSFHQASFD  180
PCVEVGRFGL DGEVDRLKRD KQVLMVELVK LRQQQQNTKT YLQTMEDRLR RTELKQQQMM  240
NFLARAMQNP NFIQQYLVQQ KDRRKELEEA ICKKRRQRPI EQSQPSNNVN VDDQVDDHDV  300
IVDGIGQISG VPSSSAGIFV KMEPQDYSNM PEFDVEELDE LAIDMESMNG VSQKMINSTE  360
AEVIVQVDQI GEEQGSSTDK DPIDDEGFWK NLLNESMEEG INIGINEEEE EEDVDVLVEQ  420
LGYLASSSPK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22830.11e-124HSF family protein