PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON79872.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family FAR1
Protein Properties Length: 330aa    MW: 38099.9 Da    PI: 6.3192
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON79872.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR170.54e-2263156190
        FAR1   1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 
                 +fY+e+Ak++GFs+r+++++ +    +  t+r fvC + g++  ++++++k +r+r+++r+gC+a ++++k++    ++w+vt + ++HnHel 
  PON79872.1  63 EFYSEFAKQCGFSIRRHRTEGKdGVGKGLTRRYFVCHRAGNTPIKTSNESKPQRNRKSSRCGCQAYMRISKTTelgGQEWRVTGFANHHNHELL 156
                 6**************9998877356667999***************99999********************9989899**************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MMSDETGQML VVYDDPSDHR SLSLDDTSSA EESPDETRLS LETANDTIPY IGQRFSTHDA  60
AYEFYSEFAK QCGFSIRRHR TEGKDGVGKG LTRRYFVCHR AGNTPIKTSN ESKPQRNRKS  120
SRCGCQAYMR ISKTTELGGQ EWRVTGFANH HNHELLEPNQ VRFLPAYRTI SESDKSRLLM  180
FAKTGISVQQ MMRLMELEKC VEPGYLPFTE KDVRNLLQSF RKLDPEEESI DLLRMCRNIR  240
EKDPNFKFEY TVDSNNRLEN IAWSYASSIQ AYDIFGDAVV FDTTHRLTAF DMPLGIWVGM  300
NNYGMPCFFG CVLLREENLR SFSWALKVIE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10240.10.0FAR1 family protein