PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON79783.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family bHLH
Protein Properties Length: 324aa    MW: 35841.3 Da    PI: 6.8064
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON79783.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH51.71.6e-164796255
                HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                r +h+  E+rRR++iN++f++Lr+l+P++    ++K + a+ L +++eY+++Lq
  PON79783.1 47 RSKHSVTEQRRRSKINERFQKLRDLVPHS----DQKRDTASFLLEVIEYVQYLQ 96
                899*************************9....8*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MRTPAKGNQE EEEFEEDEFG SKKDGPSSNN NSNSKDARNN DKASAIRSKH SVTEQRRRSK  60
INERFQKLRD LVPHSDQKRD TASFLLEVIE YVQYLQEKVQ KYEGSYQGWS SEPTKLIPWR  120
NSHWRVQNYV GHPQTIKNGP GSSFPGKFDE SNISISPNML TSTQNPVESD PSRDVPSKVL  180
EHQPEVSNKG ISMAGPTRSD GMLTHPLQIP VSDSQSTQCP TTSDVQNQQE DLMVEGGTIS  240
VTSTYSQGLL NSLAQALQNA GLDLSQASIS VQIDLGKRAN RGLPSGTSIS KDHQNPPSSK  300
QTTAHHRDAG IGDDSDQAQK RLKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.16e-92bHLH family protein