PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON79729.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

SBP

Protein Properties

Length: 511aa MW: 56673.6 Da PI: 7.3574

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON79729.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	134.6	3.2e-42	169	244	2	77
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 Cqv+gC++dls+ k+yh++hkvC+vhsk+++v+v+g+eqrfCqqCsrfh lsefD++krsCrrrLa+hnerrrk+q PON79729.1 169 CQVHGCNMDLSSSKDYHKKHKVCDVHSKTSKVIVNGIEQRFCQQCSRFHLLSEFDDGKRSCRRRLAGHNERRRKPQ 244 **************************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 511 aa Download sequence
MESWNFGPEG KNLLFSDEID WSDAFARSRK ALIQCENGFV PSRESVESLE SMELGLSDMF 60 RKTIRSSQGM EMLCGGEVGN GSINRAASPA CLISPNSSLV ENESGSKVSS SFMESNSQDS 120 PLIALKLGRL GDCRNSQSSE HSKEKPVSSP SLAAKRARTR GSYSQTPFCQ VHGCNMDLSS 180 SKDYHKKHKV CDVHSKTSKV IVNGIEQRFC QQCSRFHLLS EFDDGKRSCR RRLAGHNERR 240 RKPQLDGLSD KSQKLSHSYQ GTRYLGTSLQ KRPPFVFSDI LPGVILSPEK YEQVNQFGHV 300 KFEEEPIYSP QLAVPVMSTQ LVSKSFVHPH GTEKQLASEI PSSETEDYCF HTATTVQKTS 360 GASNSARALS LLSAQSQNLS SHSMGIPNAC PLIIQGAHQT IGQLSEKPLR LRSMERHGPN 420 GFYSCGMNPM GVDQFESVMF SESNHAVAFE VPADRGFQDS NCLDTKYCLS PENGSTVDLL 480 QLSSHLQRVE HQRNFMPVKQ ENEDFCCFPT A

Sequence ? help Back to Top

Protein Sequence Length: 511 aa Download sequence

MESWNFGPEG KNLLFSDEID WSDAFARSRK ALIQCENGFV PSRESVESLE SMELGLSDMF  60
RKTIRSSQGM EMLCGGEVGN GSINRAASPA CLISPNSSLV ENESGSKVSS SFMESNSQDS  120
PLIALKLGRL GDCRNSQSSE HSKEKPVSSP SLAAKRARTR GSYSQTPFCQ VHGCNMDLSS  180
SKDYHKKHKV CDVHSKTSKV IVNGIEQRFC QQCSRFHLLS EFDDGKRSCR RRLAGHNERR  240
RKPQLDGLSD KSQKLSHSYQ GTRYLGTSLQ KRPPFVFSDI LPGVILSPEK YEQVNQFGHV  300
KFEEEPIYSP QLAVPVMSTQ LVSKSFVHPH GTEKQLASEI PSSETEDYCF HTATTVQKTS  360
GASNSARALS LLSAQSQNLS SHSMGIPNAC PLIIQGAHQT IGQLSEKPLR LRSMERHGPN  420
GFYSCGMNPM GVDQFESVMF SESNHAVAFE VPADRGFQDS NCLDTKYCLS PENGSTVDLL  480
QLSSHLQRVE HQRNFMPVKQ ENEDFCCFPT A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69170.1	4e-49	SBP family protein