PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON79728.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | YABBY | ||||||||
Protein Properties | Length: 182aa MW: 20124.9 Da PI: 10.0961 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 152.7 | 3.3e-47 | 14 | 161 | 2 | 163 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssek 100 d s+++Cyv+CnfC+t+lav++P++ l+ +vtv+CGhC++l ++ + q+ +h ++ + + s +++ s+sts ss++ PON79728.1 14 DFSPPSDHLCYVRCNFCSTVLAVALPYKRLLDTVTVKCGHCSNLSFLSTRPPLQTAQFLDH-------------PSSLSGFCSDFSRKGSSSTSSSSST 99 567789*************************************877555555554444444.............2333344444455555555554433 PP YABBY 101 lsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf 163 +++++ +p++p v++PPek+ r Psaynrf+keeiqrika+nP+i hreafsaaaknWa + PON79728.1 100 -NTSTEPLSPKAPFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARY 161 .5666777899999***********************************************75 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence |
MNQLVQDEKV SNMDFSPPSD HLCYVRCNFC STVLAVALPY KRLLDTVTVK CGHCSNLSFL 60 STRPPLQTAQ FLDHPSSLSG FCSDFSRKGS SSTSSSSSTN TSTEPLSPKA PFVVKPPEKK 120 HRLPSAYNRF MKEEIQRIKA ANPEIPHREA FSAAAKNWAR YIPHPPAASA SGSNKRVRKQ 180 VL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69180.1 | 3e-60 | YABBY family protein |