PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON79325.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | bHLH | ||||||||
Protein Properties | Length: 232aa MW: 25278.8 Da PI: 9.795 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 41.3 | 2.7e-13 | 46 | 93 | 2 | 54 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +++h+e+ErrRR+riN +++Lr+llP+ +K +Ka+ L ++v+ +k+L PON79325.1 46 CKSHKEAERRRRQRINAHLSTLRSLLPNT-----TKTDKASLLAEVVHRVKEL 93 689*************************9.....8************999988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MREKEEPMRL ALESESSKRT TSSVVVNLMD GGDSVLSSGS KSAETCKSHK EAERRRRQRI 60 NAHLSTLRSL LPNTTKTDKA SLLAEVVHRV KELREKVADV ARQDGGLWCG FGTGSGPESW 120 PFPGESDEAS LSYCDGEPKL VKAIVCCEDR PGLSRDMARA IGSVRVRPIR AEIMTVGERT 180 KSVVVMQYVG GGSGGEEDIR ALRRALKAVV ENRASGFGLG QMVSGNKRAR IY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G25710.1 | 6e-30 | bHLH family protein |