PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON79164.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 574aa MW: 62259.6 Da PI: 6.754

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON79164.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.5	0.00028	466	498	18	55
HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++ L++++ + +K + a++L +A++YIk Lq PON79164.1 466 DRITALQQIVSPF-----GKTDTASVLYEAIQYIKFLQ 498 6788888888887.....8******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 574 aa Download sequence
MAEECAESSV ATSSSCAVVP PCNNWWDLHA VGSSALSSWC HNNNNNGSDN IPWHNIQATA 60 APNPNSNSDE DVSISTSFTN ASNHSGLTVE SSRRLVEPAA SSSDDLIAEQ QAASDNHIWS 120 HVLLNVGNNG DLHNHQDVGE NFLDMLSSSK NNISTSGMYE PACDYLKKLD SSNSNWDNNQ 180 FSNNFDDQKP IIHNSATFNE SMIENERLTN KLSSLISTWS IAPPEPLELN NINTSSTTNR 240 HYFNPQTCSI SLNSSMDHHL KQTFGYSEAS LFPPCNYIPS LKIKNGHGGG EIEASCPATA 300 GALLRRSFNG ASNIGAIGYQ VGLDSSFMAA DHNGKYHYGV PAPAPGPGTG PVDSYSSCNG 360 TSTTAKNLAD VISFGGRLGK PMIDIHASNN KPCINKSLGL SDSKKQGLQT STPTRGSGRG 420 QANTSSEGKK KRSEDTTSET NLKKPKQENS TASSAKMQAP KVKLGDRITA LQQIVSPFGK 480 TDTASVLYEA IQYIKFLQEQ VQLLSNPYMK TNSHKDPWGS LDRNKDHHMK GDHAKLDLRS 540 RGLCLVPLSC TPQVYRENTG SDYWTPTYRG CLYR

Sequence ? help Back to Top

Protein Sequence Length: 574 aa Download sequence

MAEECAESSV ATSSSCAVVP PCNNWWDLHA VGSSALSSWC HNNNNNGSDN IPWHNIQATA  60
APNPNSNSDE DVSISTSFTN ASNHSGLTVE SSRRLVEPAA SSSDDLIAEQ QAASDNHIWS  120
HVLLNVGNNG DLHNHQDVGE NFLDMLSSSK NNISTSGMYE PACDYLKKLD SSNSNWDNNQ  180
FSNNFDDQKP IIHNSATFNE SMIENERLTN KLSSLISTWS IAPPEPLELN NINTSSTTNR  240
HYFNPQTCSI SLNSSMDHHL KQTFGYSEAS LFPPCNYIPS LKIKNGHGGG EIEASCPATA  300
GALLRRSFNG ASNIGAIGYQ VGLDSSFMAA DHNGKYHYGV PAPAPGPGTG PVDSYSSCNG  360
TSTTAKNLAD VISFGGRLGK PMIDIHASNN KPCINKSLGL SDSKKQGLQT STPTRGSGRG  420
QANTSSEGKK KRSEDTTSET NLKKPKQENS TASSAKMQAP KVKLGDRITA LQQIVSPFGK  480
TDTASVLYEA IQYIKFLQEQ VQLLSNPYMK TNSHKDPWGS LDRNKDHHMK GDHAKLDLRS  540
RGLCLVPLSC TPQVYRENTG SDYWTPTYRG CLYR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31050.1	5e-59	bHLH family protein