PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON78787.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

WOX

Protein Properties

Length: 370aa MW: 41789.1 Da PI: 8.7962

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON78787.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	64.2	1.8e-20	96	156	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+t+t++ql +Leel++ +r+p+a++++e+++ l +++ ++V++WFqN++a++k+ PON78787.1 96 SSRWTPTPKQLLVLEELYRHgKRTPTAQQIQEITAMLrrfgKIEGKNVFYWFQNHKARDKR 156 58***************99************************************97 PP
2	Wus_type_Homeobox	111.5	4.4e-36	95	158	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +++RWtPtp+Q+ +Leely++G rtP++++iq+ita+L+++Gkie+kNVfyWFQN+kaR+++k+ PON78787.1 95 QSSRWTPTPKQLLVLEELYRHGKRTPTAQQIQEITAMLRRFGKIEGKNVFYWFQNHKARDKRKR 158 589***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MGCADGNEIN KLMPSSFRDL NLLPHHHVIT SFSAKNTTTI ITPIIPPNSS HTDSTSTTAN 60 RPSLINHHPA EQVWDNNKGY LNNIHVTSQV VVPMQSSRWT PTPKQLLVLE ELYRHGKRTP 120 TAQQIQEITA MLRRFGKIEG KNVFYWFQNH KARDKRKRRK ILEAAAAARS NNQRQYHNFD 180 AKSLEFTKEL PALPELSSGS RVTGLRAEQT KQEPFPNTTR ISEEFASVPR VAIEEGSTNR 240 LVRHKERELD LGLILNNSVK IEEGHATWKP MEMSYSFPAN FFLNWARPTV ISLALDGKPS 300 EKTQDCSSSL MPCGENFPSI GNGIKESDQT LELFPLRSDN FKGSPNTEGT EVTSERDSDF 360 KAELSLSFFL

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MGCADGNEIN KLMPSSFRDL NLLPHHHVIT SFSAKNTTTI ITPIIPPNSS HTDSTSTTAN  60
RPSLINHHPA EQVWDNNKGY LNNIHVTSQV VVPMQSSRWT PTPKQLLVLE ELYRHGKRTP  120
TAQQIQEITA MLRRFGKIEG KNVFYWFQNH KARDKRKRRK ILEAAAAARS NNQRQYHNFD  180
AKSLEFTKEL PALPELSSGS RVTGLRAEQT KQEPFPNTTR ISEEFASVPR VAIEEGSTNR  240
LVRHKERELD LGLILNNSVK IEEGHATWKP MEMSYSFPAN FFLNWARPTV ISLALDGKPS  300
EKTQDCSSSL MPCGENFPSI GNGIKESDQT LELFPLRSDN FKGSPNTEGT EVTSERDSDF  360
KAELSLSFFL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	155	160	KRKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18010.1	6e-31	WOX family protein