PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON78641.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | MYB | ||||||||
Protein Properties | Length: 326aa MW: 36936.5 Da PI: 6.5057 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.5 | 3e-18 | 20 | 67 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd ll++++ ++G g+W++ a++ g++Rt+k+c++rw++yl PON78641.1 20 RGPWTLEEDTLLIHYISRHGEGHWNLLAKRAGLKRTGKSCRLRWLNYL 67 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.5 | 1.2e-16 | 73 | 116 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T++E++l+++++ ++G++ W++Ia++++ gRt++++k++w++ PON78641.1 73 RGNLTPQEQLLILELHSKWGNR-WSKIAQHLP-GRTDNEIKNYWRT 116 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 326 aa Download sequence |
MPMHSSITKC QNEEETELRR GPWTLEEDTL LIHYISRHGE GHWNLLAKRA GLKRTGKSCR 60 LRWLNYLKPD IKRGNLTPQE QLLILELHSK WGNRWSKIAQ HLPGRTDNEI KNYWRTRVQK 120 QARQLNIESN SKRFLDAVRR FWMPRLLQKV EQNSSTSSSL SPDSFTTIQN GQNSSVDLIP 180 LPPDSTTSLP PYRTLSAPTT PKPTKTTAYG SNYSNGCLSS VLTGQTILSS PQITSPDSEH 240 LKTTPSSVLD KAVNDNQFWD VGCVDHDHCE DVSCSHGIAG LNLDPILEFE AFDISELDCQ 300 MAAGDWVLDD NMADALWNNM GEMCWN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68320.1 | 4e-84 | MYB family protein |