PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON78040.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

NAC

Protein Properties

Length: 298aa MW: 34173.9 Da PI: 6.3195

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON78040.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	136.5	1.8e-42	7	139	3	127
NAM 3 pGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 pGfrF Pt+eel+++yL++k++g++ +++vi+ +diy+++PwdLp+ ++++ ++++fF++r++++ +g r++r t+sgyWkatg+ v+ PON78040.1 7 PGFRFYPTEEELISFYLHNKLDGQReelnRVINRVIPLLDIYEFNPWDLPQysgvPCQGDPEQCFFFIPRQESEVRGGRPSRLTESGYWKATGSPSYVY 105 9**********************55433334468888*******64655444566799******************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyr 127 s++++++glk+t+vfy+grap+g+kt+W m+ey+ PON78040.1 106 SSQNRVIGLKRTMVFYRGRAPHGTKTQWKMNEYK 139 *******************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence
MEDNSIPGFR FYPTEEELIS FYLHNKLDGQ REELNRVINR VIPLLDIYEF NPWDLPQYSG 60 VPCQGDPEQC FFFIPRQESE VRGGRPSRLT ESGYWKATGS PSYVYSSQNR VIGLKRTMVF 120 YRGRAPHGTK TQWKMNEYKA IQGEPISGAT PMLRQEFSLC RVYKKTKCLR AFDRRPTRDE 180 IITFNPTIHD HHDNYQQAHD GHDHHQYHQH EASTTSTRLS RSPPPHPPPP PPPPPPPLAE 240 LAVMERTSSL EETSTSSGGG GSTGGQPSQS GESEHLNLQT RADDEALWDW EDINFFYN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22380.1	1e-73	NAC family protein