PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON77925.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | ERF | ||||||||
Protein Properties | Length: 274aa MW: 30851.4 Da PI: 4.9302 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 66.2 | 6.5e-21 | 126 | 176 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrd s ng +r++lg+f+taeeAa a+++a+++++g PON77925.1 126 HYRGVRRRP-WGKYAAEIRDSSRNG--ARVWLGTFDTAEEAALAYDKAALRIRG 176 8********.**********55465..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 274 aa Download sequence |
MSSIRVMAIH KDHQPEAILE NVWASYIGGE GANEGKRLPE SWDELSHLDG REGSMEFLQR 60 LPSLGRWISM GAETWEELLD SIIVDPSSNV DHDKDHSSSA TNPDKEANSI ERAKKAVVVA 120 AVPTKHYRGV RRRPWGKYAA EIRDSSRNGA RVWLGTFDTA EEAALAYDKA ALRIRGPKAY 180 LNFPLETVSK ALGLDYCSEF DSKYCLSSTS ACGNRKRASR EWEEIDHEVM MLEEPATVRR 240 SKVSSVDNRF ENDFDVFEFQ DLGSDYLDTL LSSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18450.1 | 4e-37 | ERF family protein |