PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PON77669.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 144aa MW: 16030.4 Da PI: 9.5019 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 15.7 | 2.7e-05 | 33 | 72 | 10 | 54 |
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + R +++ ++ L++l+ + +K + a++L +A+eYI+ L PON77669.1 33 KERKENLGAKIVALQQLVSPY-----GKTDTASVLHEAMEYIQFL 72 566777778899999999998.....9****************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 144 aa Download sequence |
MTEHKRSPCS VDQSNFPSLA SKRQKPDLSI STKERKENLG AKIVALQQLV SPYGKTDTAS 60 VLHEAMEYIQ FLHEQVKVLS APYLQSTPPT KMQELEPYNL RSRGLCLVPV SCTLGVARSN 120 GADIWAPIKT TSPKFEKSSI SQFH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G05710.3 | 5e-61 | bHLH family protein |