PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON77558.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | MYB | ||||||||
Protein Properties | Length: 416aa MW: 45937.3 Da PI: 6.9954 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 62.2 | 1.1e-19 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+lvd+++++G g+W++ ++ g++R++k+c++rw +yl PON77558.1 14 KGPWTPEEDEKLVDYIRRHGHGSWRALPKLAGLNRCGKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 53.2 | 6.8e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE++l++++++ lG++ W+tIa +++ gRt++++k+ w+++l PON77558.1 67 RGKFSEEEEKLIINLHAVLGNK-WSTIAGHLP-GRTDNEIKNLWNTHL 112 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 416 aa Download sequence |
MGRPPSSDEN GLKKGPWTPE EDEKLVDYIR RHGHGSWRAL PKLAGLNRCG KSCRLRWTNY 60 LRPDIKRGKF SEEEEKLIIN LHAVLGNKWS TIAGHLPGRT DNEIKNLWNT HLKKKLLQMG 120 IDPVTHRPRT DLNILSNLPQ LIAAANFAST FLNHPTMWDT TTTAAHSTLT AALQPPDAAK 180 IQLLHHILQV LGTGTTPSTS TSTSTPTMEA MLNLLGLSSI SPDHQPYILD EYLRLVEHSR 240 LQGYSINGPV GGFASQINPT HIQTSSTTTS TFPNIEAPRH HHQQPVNMDN STYPSISSSK 300 LDSTNHNNTN IMSMLDTYGY KSTNSSASPI NCNQLPLLVS ASPDDHHHDK ISSSVANRNP 360 SNKANPNHDI ISSNPSSATS TTFEAWGDLI DDETTDSYWK DIMDLASSQT LVNLVD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G16770.2 | 2e-94 | MYB family protein |